View source for Robin Kirkpatrick

== Paper Summaries ==

AP 225 (Fall 2011)

Introduction : [[ Danyiar Nurgaliev, Timur Gatanov, and Daniel J. Needleman, Automated Identification of Microtubules in Cellular Electron Tomography. Methods in Cell Biology, 2010, 97.]]

Surface Forces : [[ Hydrodynamic Coupling of Two Brownian Spheres to a Planar Surface, E. R. Dufresne, T. M. Squires, M. P. Brenner and D. G. Grier, Phys. Rev. Lett,85, 3317 (2000).]]

Charged Interfaces: [[ "Folding of Electrostatically Charged Beads-on-a-String: An Experimental Realization of a Theoretical Model", Reches, M., Snyder, P.W., and Whitesides, G.M., Proc. Natl. Acad. Sci. USA, 2009, 106, 17644-17649.]]

Capillarity: [[Dynamic mechanisms for shear-dependent apparent slip on hydrophobic surfaces, E. Lauga and M. P. Brenner, Phys. Rev. E (2003)]]

Surfactants and Spontateous ordering: [[Plasmid Segregation: Is a Total Understanding Within Reach?]]

Polymers and Polymer Solutions: [[ G. Lois, J. Blawzdziewicz, and C. S. O'Hern, "Protein folding on rugged energy landscapes: Conformational diffusion on fractal networks", Phys. Rev. E 81 (2010) 051907]]

Equillibria and Phase Diagrams: [[Jan Brugues and Daniel J. Needleman, Nonequilibrium Fluctuations in Metaphase Spindles: Polarized Light Microscopy, Image Registration, and Correlation Functions Proc. SPIE , 2010, 7618. ]]

AP 226 (Spring 2012)

[[Tunable Liquid Optics: Electrowetting Controlled Liquid Mirrors Based on Self-Assembled Janus Tiles]]

[[Dynamic Equilibrium for Surface Nanobubble stabilization]]

[[Electric-filed-induced capillary attraction between like-charges particles at liquid interfaces]]

[[Like-Charge Attraction and Hydrodynamic Interaction]]



== Keyword Summary ==

[[Image Segmentation]] 

[[Electron Tomography]] 

[[Simulated Annealing]]
 
[[Microtubules]]

[[Method of Images]] 

[[Brownian Motion]]

[[Hydrodynamic Coupling]]

[[Interaction Potential]] 

[[Boltzmann Distribution]]

[[Energy Landscape]]

[[Protein Folding]] 

[[Polymer Physics]]

[[Fractal Dimension]] 

[[Fractal Network]] 

[[Levinthal's Paradox]]

[[Spindle]]

[[Microtubule]] 

[[Image Registration]] 

[[Correlation Function]] 

[[Active Liquid Crystal]]

[[Polymer Physics]] 

[[Electrostatics]]

[[triboelectric series]] 

[[RNA Hairpin]]

[[RNA]]

[[Cytoskeleton]] 

[[Microfilaments]]

[[Intermediate filaments]] 

[[Mechanotransduction]]

[[Plasmid]]

[[DNA segregation]]

[[No-Slip Boundary Condition]] 

[[Diffusion]]